Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGAACGGGAGCAGCTGCT
..((((((((..(((((((((&)))))..))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287390
GeneSymbolKYAT1
Binding site1322,1344
Score0.846
Seed1
Au0.397
Energy-20.3
Binding len22
Me-11.129
Phylopstem2.790826636363636
Phylopflank2.5176530312499996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure