Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGGGTGCTGGGTC
(((((((((.((..((((....&)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287396
GeneSymbolSMIM29
Binding site692,709
Score0.846
Seed1
Au0.338
Energy-16.1
Binding len17
Me-7.326
Phylopstem1.1308767888888887
Phylopflank1.39419367875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure