Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGCCGGCTGGGCTGCAGA
((((((((.((((((...(((&)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287396
GeneSymbolSMIM29
Binding site38,60
Score0.846
Seed1
Au0.25
Energy-20.2
Binding len22
Me-5.227
Phylopstem0.4994884125
Phylopflank0.6613228284999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure