Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGGGGCCTAGGGAGCAGCTGCT
..((((((((((((.(.((((&)))).).))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287421
GeneSymbolZSCAN26
Binding site116,142
Score0.846
Seed1
Au0.309
Energy-23.8
Binding len26
Me-5.692
Phylopstem-0.28926745555555555
Phylopflank0.24394342375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure