Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGGCGGTTGGTCAGTGTGAATTTGTGACAGCTGCAGTTGCT
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287431
GeneSymbolARFIP1
Binding site73,117
Score1.0
Seed1
Au0.382
Energy-24.8
Binding len16
Me-4.957
Phylopstem-0.006634428571428577
Phylopflank0.8378151574999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure