Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCGGCGGCGGCTGCAGG
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287439
GeneSymbolJADE1
Binding site10,33
Score1.0
Seed1
Au0.274
Energy-25.7
Binding len18
Me-6.762
Phylopstem1.3804541499999998
Phylopflank1.4366574642857142
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure