Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACACCTTCGTCAACCTGCTGGATGTTGCCAGGG
.(((((((.(((..((((....&.))))....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287442
GeneSymbolJADE1
Binding site1432,1468
Score0.846
Seed1
Au0.441
Energy-19.0
Binding len20
Me-6.996
Phylopstem3.6443388
Phylopflank3.9522035625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure