Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGCAACATCTGTGTGCACCAGGC
.(((((((((((((((......&.)))).)))))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287443
GeneSymbolJADE1
Binding site829,855
Score0.846
Seed1
Au0.5
Energy-16.9
Binding len20
Me-3.793
Phylopstem6.127682722222222
Phylopflank5.713210416250001
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure