Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGCGGGAGCAGGATGTCTTATTTAGGAGGCTGCAGCTGTT
..((((((((((((((((((.&.))))))......)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287443
GeneSymbolJADE1
Binding site1588,1632
Score0.846
Seed1
Au0.382
Energy-22.0
Binding len26
Me-4.957
Phylopstem4.410640916666666
Phylopflank5.414899745
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure