Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTCAAGAGATTGCAGTGCAGG
(((((.((((((((.......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287445
GeneSymbolSMIM8
Binding site981,1005
Score0.936
Seed0
Au0.544
Energy-15.0
Binding len15
Me-6.807
Phylopstem0.20582199999999998
Phylopflank0.22192053
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure