Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAG
((.((((((((((((.((((.&.)))).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287489
GeneSymbolOTOF
Binding site6877,6913
Score1.0
Seed0
Au0.324
Energy-28.9
Binding len22
Me-5.728
Phylopstem0.05468074166666669
Phylopflank0.310265055
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure