Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCAGGTGA
...((.(((((((((......&))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287492
GeneSymbolFIGNL1
Binding site41,54
Score1.0
Seed0
Au0.471
Energy-19.8
Binding len13
Me-8.649
Phylopstem-0.10671133333333331
Phylopflank0.07073699072580647
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end2
Position5UTR
2D Structure