Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCAGGATAGCAGC
((((..(((((((((......&)))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287493
GeneSymbolFIGNL1
Binding site41,59
Score0.846
Seed0
Au0.426
Energy-18.9
Binding len18
Me-10.191
Phylopstem0.32836466666666664
Phylopflank0.062488586290322584
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end2
Position5UTR
2D Structure