Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCACACCAGCCGCAGAACCTCTAAAATGCAGA
(((((.(((((((((...((.&))....)))))))))...........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287495
GeneSymbolFIGNL1
Binding site35,67
Score0.846
Seed0
Au0.441
Energy-17.7
Binding len32
Me-6.072
Phylopstem0.32836466666666664
Phylopflank0.062488586290322584
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end4
Position5UTR
2D Structure