Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAAGGAAGAGCGGACCGCGCTGCAGG
(((((((.((((((...((((&))))............))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287499
GeneSymbolIQCE
Binding site1398,1428
Score0.846
Seed1
Au0.397
Energy-22.9
Binding len30
Me-7.22
Phylopstem0.8939901428571427
Phylopflank0.81976631875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure