Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCCAGGCTCCGTGCGGACTGTGAT
(((((((((((((((((((((&))))))))))).........)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287501
GeneSymbolIQCE
Binding site5759,5791
Score0.846
Seed1
Au0.353
Energy-25.7
Binding len32
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings21
Pairings in 3prime end8
Position3UTR
2D Structure