Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCCATAGAAATGCAGTTGCGAA
(((((((((((((((.((((.&)))))))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287503
GeneSymbolITPRID2
Binding site3052,3080
Score1.0
Seed1
Au0.603
Energy-24.4
Binding len28
Me-4.171
Phylopstem3.7851268
Phylopflank2.395301315375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure