Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCGTACACCAGGCCCTTCTGCGATGTTTTACCTGGCTGCGGCTGTG
..((((((((((((...((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287506
GeneSymbolPPCS
Binding site146,194
Score1.0
Seed1
Au0.5
Energy-22.8
Binding len18
Me-5.925
Phylopstem0.5409984666666666
Phylopflank2.3642835
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure