Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTACAGCGCAGTAAGATGAGTATTGCAAT
((((((((((.(((((((.((&)).))))))))))))...........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287512
GeneSymbolTTC26
Binding site1946,1978
Score0.846
Seed1
Au0.706
Energy-18.4
Binding len32
Me-6.762
Phylopstem0.15784975238095234
Phylopflank0.01865766500000001
Longest consecutive pairings12
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure