Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCCTAATGATGCATCATGCCAGGA
.((((((((...(((((.....&.))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287527
GeneSymbolCLIP4
Binding site409,435
Score0.923
Seed1
Au0.676
Energy-17.7
Binding len16
Me-11.207
Phylopstem5.0185502500000005
Phylopflank4.3428981587500015
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure