Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCTTGGATCTGTCAGCAGCTGCT
..(((((((((((((((.(((&))).)))...)))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287527
GeneSymbolCLIP4
Binding site1519,1547
Score0.846
Seed1
Au0.515
Energy-19.8
Binding len28
Me-4.957
Phylopstem1.6789859739130428
Phylopflank1.3297179899999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure