Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCATATTGCAGCATACAACTTGTGTGCAGG
(((((((((((((((((((((&)))))))).))))))))............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287528
GeneSymbolCLIP4
Binding site804,839
Score0.923
Seed1
Au0.5
Energy-21.4
Binding len35
Me-3.938
Phylopstem5.596671264705883
Phylopflank4.93899672125
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure