Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAACCTGGGCTGG
...(((((..((((((((((.&))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287586
GeneSymbolSLC50A1
Binding site116,134
Score1.0
Seed0
Au0.397
Energy-25.1
Binding len18
Me-8.813
Phylopstem0.59326898
Phylopflank1.55239843125
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure