Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGAAGAGGGGATGAGGGAAAGAAATGGGGGGCCTGGGTCA
.(((((.((..((((((((((&)))))..))))).....................))..))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001287593
GeneSymbolCLIC1
Binding site1435,1478
Score0.923
Seed0
Au0.471
Energy-22.4
Binding len43
Me-9.404
Phylopstem-0.0023598000000000043
Phylopflank-0.020297815000000004
Longest consecutive pairings5
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure