Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGGCTGAAGAACAACCGCAGGTCGAA
(((.(.((((((((((.....&.)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287593
GeneSymbolCLIC1
Binding site570,600
Score1.0
Seed0
Au0.412
Energy-20.1
Binding len17
Me-8.871
Phylopstem1.6669236400000003
Phylopflank3.392386975
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure