Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGGCTGAAGAACAACCGCAGGTCGAA
(((.(.((((((((((.....&.)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287594
GeneSymbolCLIC1
Binding site95,125
Score0.846
Seed0
Au0.412
Energy-20.1
Binding len17
Me-8.871
Phylopstem-0.6056694999999999
Phylopflank0.39773699999999984
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure