Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTACATTGCCACCCAGGG
.(((((....((((((((((((&))))))))))))....))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001364878
GeneSymbolPTPN7
Binding site539,561
Score0.923
Seed0
Au0.426
Energy-22.2
Binding len22
Me-9.95
Phylopstem0.6197080833333333
Phylopflank0.22996157975
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure