Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGTCGCAGTTTCGCAGCTGTT
..((((((((((((((..(((&)))....))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287745
GeneSymbolFDFT1
Binding site436,460
Score0.846
Seed1
Au0.485
Energy-20.0
Binding len24
Me-4.957
Phylopstem-0.8518273249999999
Phylopflank-0.3196739365
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure