Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAATGAACTTATAACCAATGCACTGCAC
.(((((.((((((((((((..&.)))))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287751
GeneSymbolFDFT1
Binding site925,957
Score0.923
Seed0
Au0.529
Energy-21.2
Binding len22
Me-5.337
Phylopstem4.990286786666666
Phylopflank3.66170572875
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure