Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAGTACAGCAGTTGCAGG
((((((((((.((..(..(((&)))..)..)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287754
GeneSymbolTRAF3IP3
Binding site624,646
Score0.923
Seed1
Au0.544
Energy-19.3
Binding len22
Me-8.355
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure