Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCCGGATCTAAGGGTGACTGCTGCTGTAGA
(((((((.(((((((.(((((&))))).).............)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287758
GeneSymbolCOL4A6
Binding site2159,2194
Score0.923
Seed1
Au0.485
Energy-19.3
Binding len35
Me-6.484
Phylopstem2.328600840999999
Phylopflank2.33261682925
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure