Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCTGTGGCTGTT
..(((((((((((((......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364879
GeneSymbolIL1RAP
Binding site4224,4238
Score1.0
Seed1
Au0.559
Energy-18.0
Binding len14
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure