Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGAAGGCCAGCAGCTGGGT
.(.(((((((((((...((((&))))...)))).))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287759
GeneSymbolCOL4A6
Binding site5837,5859
Score0.923
Seed0
Au0.441
Energy-20.8
Binding len22
Me-6.319
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings3
Pairings in 3prime end5
Position3UTR
2D Structure