Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTTTACCAGGTCTGCCAGGC
.(((((((.((...((((((((&))))))))...)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287760
GeneSymbolCOL4A6
Binding site1965,1987
Score0.846
Seed1
Au0.368
Energy-19.8
Binding len22
Me-10.342
Phylopstem5.219335750000001
Phylopflank4.19924660875
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure