Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGTGAGGCTGCCCTAACTTCCATTAGGGG
...(((((((((((((((((.&))))).)))))))).............)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001287811
GeneSymbolDNAJC16
Binding site5214,5246
Score0.846
Seed0
Au0.485
Energy-27.6
Binding len32
Me-6.515
Phylopstem-0.603381670967742
Phylopflank-0.28351741625000004
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure