Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAATCAATTTGCAGCTGCC
..(((((((((((((...((.&))...))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287811
GeneSymbolDNAJC16
Binding site5364,5384
Score0.846
Seed1
Au0.75
Energy-20.3
Binding len20
Me-5.19
Phylopstem-0.5711210999999999
Phylopflank0.018198224999999957
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure