Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGGAGAAGTCACCTGCAGTGGCTACCTCCACAGCTGCAC
.((((((((.((..(((((((&.))))........)))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287815
GeneSymbolUBAP2L
Binding site1447,1491
Score0.923
Seed1
Au0.397
Energy-22.1
Binding len30
Me-7.182
Phylopstem2.1445738375
Phylopflank3.5672606774999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure