Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGGCTGAAGAACAACCGCAGGTCGAA
(((.(.((((((((((.....&.)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288
GeneSymbolCLIC1
Binding site227,257
Score0.923
Seed0
Au0.412
Energy-20.1
Binding len17
Me-8.871
Phylopstem-0.023000000000000003
Phylopflank1.0100436325
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure