Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGGATCTTTTCTTCTAAACAGCAATTTATAGCCACAGCTGA
...((((((.(((((((((..&.))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288563
GeneSymbolDNAI3
Binding site2357,2402
Score0.923
Seed0
Au0.691
Energy-21.1
Binding len18
Me-7.757
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure