Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCAGCGGTGGAAGCTGCAGG
((((((((((.(((((..(((&)))..))))).))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288565
GeneSymbolTMEM9
Binding site1028,1053
Score0.877
Seed1
Au0.382
Energy-23.1
Binding len25
Me-6.762
Phylopstem2.9099480769230768
Phylopflank2.8046022586249997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure