Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAAAGATTGCAGCTGGGAT
((.(((((((((((...((((&))))...))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288579
GeneSymbolBROX
Binding site735,757
Score0.846
Seed0
Au0.647
Energy-23.5
Binding len22
Me-6.464
Phylopstem3.8663211909090904
Phylopflank4.8213968311999995
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure