Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAACTATTGACCATCATTTTAATCGGACCAACTGCAGCTGTAAC
(((((((((((((((......&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288590
GeneSymbolZKSCAN7
Binding site338,386
Score1.0
Seed1
Au0.559
Energy-25.2
Binding len17
Me-4.171
Phylopstem0.5367995866666667
Phylopflank0.14712645375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure