Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGGACCGTGGCCTTTGCAT
.(((((((((((((..(((((&)))))..)))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288609
GeneSymbolJPT1
Binding site693,717
Score0.846
Seed1
Au0.485
Energy-23.8
Binding len24
Me-4.762
Phylopstem0.49159335462500003
Phylopflank3.0265852275000005
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure