Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTGCCTTGCCGCCTGCAAA
((((((..(((((...(((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288609
GeneSymbolJPT1
Binding site1929,1953
Score1.0
Seed0
Au0.515
Energy-19.9
Binding len18
Me-9.62
Phylopstem-0.2121055666666666
Phylopflank0.24763782799999995
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure