Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAACGACATGTACCACAGCCGCGCGCTGCAGG
((((((((((((((((..(((&.)))))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288614
GeneSymbolCST3
Binding site279,316
Score0.846
Seed1
Au0.353
Energy-28.0
Binding len22
Me-3.938
Phylopstem0.22669756764705884
Phylopflank0.12054855149999981
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure