Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCTCGAGTAGCTGGAAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288615
GeneSymbolTTC23
Binding site502,528
Score0.846
Seed0
Au0.5
Energy-19.7
Binding len26
Me-5.728
Phylopstem0.15637275555555552
Phylopflank-0.048012198749999985
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position5UTR
2D Structure