Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAAAAGCCCAGTTGCAGA
(((((((((.(((((((((..&))))))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288653
GeneSymbolCLTC
Binding site3579,3601
Score0.885
Seed1
Au0.529
Energy-22.7
Binding len22
Me-5.18
Phylopstem5.774887500000001
Phylopflank5.8951367682499995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure