Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACTGCAGCGTGCAT
.((((((((((((....((((&)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288653
GeneSymbolCLTC
Binding site2110,2128
Score0.923
Seed1
Au0.603
Energy-21.6
Binding len18
Me-5.619
Phylopstem5.992180615384616
Phylopflank5.848947838887501
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure