Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCCGCGGCTGCT
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288655
GeneSymbolDCAKD
Binding site142,155
Score0.808
Seed1
Au0.118
Energy-23.9
Binding len13
Me-5.925
Phylopstem-0.28906494166666663
Phylopflank-0.10178711999999998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure