Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCAGCTCTAGGCT
..(((((((((((((((((((&))))))))))).........................))))))....)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288656
GeneSymbolUBN1
Binding site3583,3632
Score0.846
Seed1
Au0.338
Energy-22.2
Binding len49
Me-4.957
Phylopstem0.31902791041666667
Phylopflank0.16012466499999997
Longest consecutive pairings11
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure